Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc60Q8C4J0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc60Q8C4J0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc60Q8C4J0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc60Q8C4J0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc60Q8C4J0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms