Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Gm16215-201ENSMUST00000161990 637 ntBASIC16.24■□□□□ 0.19
Usp44Q8C2S0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Gm42612-201ENSMUST00000197986 623 ntBASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Gm43170-201ENSMUST00000199827 612 ntBASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp44Q8C2S0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Gm10576-201ENSMUST00000191927 825 ntBASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp44Q8C2S0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp44Q8C2S0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms