Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim4Q8C1Q6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Gm11779-201ENSMUST00000118541 368 ntBASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Mir1895-201ENSMUST00000122615 79 ntBASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Gm18049-201ENSMUST00000208909 581 ntBASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim4Q8C1Q6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Smim4Q8C1Q6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smim4Q8C1Q6 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.65□□□□□ -0.55
Smim4Q8C1Q6 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.65□□□□□ -0.55
Smim4Q8C1Q6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smim4Q8C1Q6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Matn2-206ENSMUST00000228570 2798 ntBASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Gm11745-201ENSMUST00000121669 448 ntBASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Gm27494-201ENSMUST00000184735 189 ntBASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Gm10175-201ENSMUST00000086013 645 ntBASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.64□□□□□ -0.55
Smim4Q8C1Q6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms