Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Gm13453-201ENSMUST00000118708 357 ntBASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Gm3436-201ENSMUST00000179930 840 ntBASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trub1Q8C0D0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.34□□□□□ -0.11
Trub1Q8C0D0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.34□□□□□ -0.11
Trub1Q8C0D0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Gm7775-201ENSMUST00000218871 853 ntBASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trub1Q8C0D0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trub1Q8C0D0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trub1Q8C0D0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Trub1Q8C0D0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trub1Q8C0D0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trub1Q8C0D0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trub1Q8C0D0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trub1Q8C0D0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trub1Q8C0D0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trub1Q8C0D0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Mir698-201ENSMUST00000102164 109 ntBASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Gm9063-201ENSMUST00000223299 582 ntBASIC14.33□□□□□ -0.12
Trub1Q8C0D0 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms