Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Gm23218-201ENSMUST00000158124 276 ntBASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Gm8927-201ENSMUST00000181978 981 ntBASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Gm11222-201ENSMUST00000119005 738 ntBASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Gm12948-201ENSMUST00000119406 682 ntBASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.82□□□□□ -0.68
Chd9Q8BYH8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gm12203-201ENSMUST00000118235 598 ntBASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gm15957-201ENSMUST00000118893 974 ntBASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gm12209-201ENSMUST00000120089 596 ntBASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gm44397-201ENSMUST00000195950 113 ntBASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Gm18473-201ENSMUST00000220543 868 ntBASIC10.81□□□□□ -0.68
Chd9Q8BYH8 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd9Q8BYH8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd9Q8BYH8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms