Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Gm22175-201ENSMUST00000175007 78 ntBASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Auts2-212ENSMUST00000178555 309 ntBASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trerf1Q8BXJ2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Gm27430-201ENSMUST00000184585 107 ntBASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Gm44333-201ENSMUST00000197168 107 ntBASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Gm5779-201ENSMUST00000218467 910 ntBASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trerf1Q8BXJ2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Gm18049-201ENSMUST00000208909 581 ntBASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trerf1Q8BXJ2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Trerf1Q8BXJ2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trerf1Q8BXJ2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Trerf1Q8BXJ2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trerf1Q8BXJ2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms