Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ube3dQ8BX13 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Gm24543-201ENSMUST00000103867 82 ntBASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Gm27533-201ENSMUST00000183800 152 ntBASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Mir8102-201ENSMUST00000184148 139 ntBASIC12.38□□□□□ -0.43
Ube3dQ8BX13 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ube3dQ8BX13 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Gm12428-201ENSMUST00000119844 727 ntBASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Mir6977-201ENSMUST00000184960 64 ntBASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.37□□□□□ -0.43
Ube3dQ8BX13 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ube3dQ8BX13 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms