Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Gm12363-201ENSMUST00000122250 668 ntBASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Gm25668-201ENSMUST00000157700 129 ntBASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Gm24548-201ENSMUST00000158650 108 ntBASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Rps4l-202ENSMUST00000204242 789 ntBASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.9■□□□□ 0.46
Col16a1Q8BLX7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Col16a1Q8BLX7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Col16a1Q8BLX7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col16a1Q8BLX7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Gm37489-201ENSMUST00000191883 159 ntBASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col16a1Q8BLX7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Gm16505-201ENSMUST00000179981 232 ntBASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Mospd4-201ENSMUST00000180618 576 ntBASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Gm28693-202ENSMUST00000190758 331 ntBASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Col16a1Q8BLX7 Gm11637-201ENSMUST00000120601 592 ntBASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Gm11978-201ENSMUST00000122315 466 ntBASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms