Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Chmp2bQ8BJF9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Gm2810-201ENSMUST00000118681 990 ntBASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Grk6-205ENSMUST00000224653 2976 ntBASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp2bQ8BJF9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm29310-201ENSMUST00000185468 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21825-201ENSMUST00000185728 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm29109-201ENSMUST00000185895 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21896-201ENSMUST00000186520 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21873-201ENSMUST00000186728 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21794-201ENSMUST00000187056 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21880-201ENSMUST00000187275 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21826-201ENSMUST00000187451 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21198-201ENSMUST00000188393 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21749-201ENSMUST00000189343 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21901-201ENSMUST00000189568 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm29424-201ENSMUST00000189716 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm28599-201ENSMUST00000189838 694 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21867-201ENSMUST00000189917 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm29269-201ENSMUST00000190087 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21722-201ENSMUST00000190153 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm28423-201ENSMUST00000190701 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21899-201ENSMUST00000190745 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21910-201ENSMUST00000191163 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21849-201ENSMUST00000191571 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm28678-201ENSMUST00000191593 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm20910-201ENSMUST00000193268 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm21871-201ENSMUST00000194621 696 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms