Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Gm10576-201ENSMUST00000191927 825 ntBASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Gm45098-201ENSMUST00000207179 657 ntBASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Gm5779-201ENSMUST00000218467 910 ntBASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh20Q8BIZ0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Gm15693-201ENSMUST00000120470 637 ntBASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 AA543401-201ENSMUST00000164248 1269 ntBASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Gm2451-201ENSMUST00000199447 999 ntBASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Gm10290-201ENSMUST00000200451 999 ntBASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh20Q8BIZ0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Gm14042-201ENSMUST00000120139 833 ntBASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Auts2-212ENSMUST00000178555 309 ntBASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Gm9182-201ENSMUST00000217829 639 ntBASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms