Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc40Q8BI79 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc40Q8BI79 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Gm44335-201ENSMUST00000196879 141 ntBASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Gm44297-201ENSMUST00000198304 141 ntBASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Gm44346-201ENSMUST00000198851 141 ntBASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc40Q8BI79 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Ccdc40Q8BI79 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms