Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Gm5566-201ENSMUST00000116118 459 ntBASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Depdc1bQ8BH88 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Gm15957-201ENSMUST00000118893 974 ntBASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Gm9719-201ENSMUST00000162765 543 ntBASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Gm27533-201ENSMUST00000183800 152 ntBASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Gm5186-201ENSMUST00000218781 920 ntBASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.14■□□□□ 0.01
Depdc1bQ8BH88 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Gm9063-201ENSMUST00000223299 582 ntBASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Depdc1bQ8BH88 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Depdc1bQ8BH88 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms