Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Samm50Q8BGH2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.33■□□□□ 0.21
Samm50Q8BGH2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Samm50Q8BGH2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Gm15693-201ENSMUST00000120470 637 ntBASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Samm50Q8BGH2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Samm50Q8BGH2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Gm18766-201ENSMUST00000189811 808 ntBASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Gm29541-201ENSMUST00000191351 678 ntBASIC16.31■□□□□ 0.2
Samm50Q8BGH2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Samm50Q8BGH2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms