Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.57□□□□□ -0.24
Trim50Q810I2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim50Q810I2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.57□□□□□ -0.24
Trim50Q810I2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim50Q810I2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim50Q810I2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim50Q810I2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trim50Q810I2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Gm37714-201ENSMUST00000194742 342 ntBASIC13.57□□□□□ -0.24
Trim50Q810I2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim50Q810I2 Gm18027-201ENSMUST00000218947 619 ntBASIC13.57□□□□□ -0.24
Trim50Q810I2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim50Q810I2 Gm9229-201ENSMUST00000222777 126 ntBASIC13.57□□□□□ -0.24
Trim50Q810I2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.57□□□□□ -0.24
Trim50Q810I2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim50Q810I2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim50Q810I2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.57□□□□□ -0.24
Trim50Q810I2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.57□□□□□ -0.24
Trim50Q810I2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim50Q810I2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim50Q810I2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim50Q810I2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim50Q810I2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Trim50Q810I2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.56□□□□□ -0.24
Trim50Q810I2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Trim50Q810I2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim50Q810I2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim50Q810I2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim50Q810I2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim50Q810I2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim50Q810I2 Gm27321-201ENSMUST00000185021 205 ntBASIC13.56□□□□□ -0.24
Trim50Q810I2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim50Q810I2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.56□□□□□ -0.24
Trim50Q810I2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim50Q810I2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim50Q810I2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim50Q810I2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.55□□□□□ -0.24
Trim50Q810I2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim50Q810I2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Gm15460-201ENSMUST00000118147 391 ntBASIC13.55□□□□□ -0.24
Trim50Q810I2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Gm43703-201ENSMUST00000200523 763 ntBASIC13.55□□□□□ -0.24
Trim50Q810I2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.55□□□□□ -0.24
Trim50Q810I2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms