Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Gm43575-201ENSMUST00000196420 516 ntBASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Shd-206ENSMUST00000225145 998 ntBASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Gm8396-201ENSMUST00000057361 823 ntBASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Grk6-205ENSMUST00000224653 2976 ntBASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Mir1897-201ENSMUST00000122581 272 ntBASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Gm27533-201ENSMUST00000183800 152 ntBASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc116Q80X53 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Gm38294-201ENSMUST00000192831 381 ntBASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Mir497b-201ENSMUST00000093601 125 ntBASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc116Q80X53 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms