Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim62Q80V85 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim62Q80V85 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim62Q80V85 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim62Q80V85 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Gm44855-201ENSMUST00000205725 362 ntBASIC14.39□□□□□ -0.11
Trim62Q80V85 Gm19220-201ENSMUST00000222682 803 ntBASIC14.39□□□□□ -0.11
Trim62Q80V85 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim62Q80V85 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Trim62Q80V85 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Trim62Q80V85 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim62Q80V85 Syt7-205ENSMUST00000224135 1557 ntBASIC14.39□□□□□ -0.11
Trim62Q80V85 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trim62Q80V85 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim62Q80V85 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim62Q80V85 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Gm7488-201ENSMUST00000117148 684 ntBASIC14.38□□□□□ -0.11
Trim62Q80V85 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Trim62Q80V85 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trim62Q80V85 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim62Q80V85 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim62Q80V85 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim62Q80V85 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.38□□□□□ -0.11
Trim62Q80V85 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim62Q80V85 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim62Q80V85 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim62Q80V85 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim62Q80V85 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trim62Q80V85 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim62Q80V85 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trim62Q80V85 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim62Q80V85 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim62Q80V85 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim62Q80V85 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim62Q80V85 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim62Q80V85 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.37□□□□□ -0.11
Trim62Q80V85 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim62Q80V85 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.37□□□□□ -0.11
Trim62Q80V85 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.37□□□□□ -0.11
Trim62Q80V85 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trim62Q80V85 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim62Q80V85 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim62Q80V85 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trim62Q80V85 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim62Q80V85 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim62Q80V85 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Trim62Q80V85 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.36□□□□□ -0.11
Trim62Q80V85 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms