Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Gm12341-201ENSMUST00000119724 503 ntBASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Gm11434-201ENSMUST00000122379 629 ntBASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Gm27772-201ENSMUST00000184900 187 ntBASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Gm29741-201ENSMUST00000192667 421 ntBASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh19Q80TF3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Gm15240-201ENSMUST00000118156 720 ntBASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Gm8584-201ENSMUST00000171982 758 ntBASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms