Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Gm4271-201ENSMUST00000174444 973 ntBASIC24.44■■□□□ 1.5
Rtl1Q7M732 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC24.44■■□□□ 1.5
Rtl1Q7M732 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtl1Q7M732 Gm9899-201ENSMUST00000065519 555 ntBASIC24.44■■□□□ 1.5
Rtl1Q7M732 Gm10012-201ENSMUST00000078252 192 ntBASIC24.44■■□□□ 1.5
Rtl1Q7M732 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC24.43■■□□□ 1.5
Rtl1Q7M732 AC159649.2-201ENSMUST00000222984 3223 ntBASIC24.43■■□□□ 1.5
Rtl1Q7M732 Tmed9-203ENSMUST00000224741 1450 ntBASIC24.43■■□□□ 1.5
Rtl1Q7M732 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Gm8213-201ENSMUST00000118191 441 ntBASIC24.43■■□□□ 1.5
Rtl1Q7M732 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtl1Q7M732 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Shroom3-211ENSMUST00000225438 5742 ntBASIC24.42■■□□□ 1.5
Rtl1Q7M732 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC24.42■■□□□ 1.5
Rtl1Q7M732 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC24.41■■□□□ 1.5
Rtl1Q7M732 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Gm17420-201ENSMUST00000164753 153 ntBASIC24.41■■□□□ 1.5
Rtl1Q7M732 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Rtl1Q7M732 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Rtl1Q7M732 Gm19863-201ENSMUST00000192480 2218 ntBASIC24.4■■□□□ 1.5
Rtl1Q7M732 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Gm14350-201ENSMUST00000116642 640 ntBASIC24.4■■□□□ 1.5
Rtl1Q7M732 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC24.4■■□□□ 1.5
Rtl1Q7M732 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC24.4■■□□□ 1.5
Rtl1Q7M732 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rtl1Q7M732 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Rtl1Q7M732 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rtl1Q7M732 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC24.39■■□□□ 1.5
Rtl1Q7M732 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC24.39■■□□□ 1.5
Rtl1Q7M732 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rtl1Q7M732 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Rtl1Q7M732 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rtl1Q7M732 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rtl1Q7M732 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rtl1Q7M732 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rtl1Q7M732 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms