Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Gm4984-201ENSMUST00000115987 360 ntBASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Gm24196-201ENSMUST00000179161 110 ntBASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Gm10478-201ENSMUST00000084451 396 ntBASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Gm37411-201ENSMUST00000194180 2282 ntBASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Syne1Q6ZWR6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Gm19078-201ENSMUST00000206311 727 ntBASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Gm9252-201ENSMUST00000172364 1602 ntBASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Gm10313-201ENSMUST00000095320 1002 ntBASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Mir692-1-201ENSMUST00000102263 109 ntBASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Gm11524-201ENSMUST00000119349 807 ntBASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Gm33320-201ENSMUST00000192232 530 ntBASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Syne1Q6ZWR6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms