Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Rps4l-201ENSMUST00000071745 943 ntBASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.18□□□□□ -0.3
Rnf220Q6PDX6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Gm7787-201ENSMUST00000216858 688 ntBASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf220Q6PDX6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Gm7230-201ENSMUST00000173026 815 ntBASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Matn2-203ENSMUST00000226766 3252 ntBASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.16□□□□□ -0.3
Rnf220Q6PDX6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rnf220Q6PDX6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf220Q6PDX6 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.15□□□□□ -0.3
Rnf220Q6PDX6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rnf220Q6PDX6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf220Q6PDX6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf220Q6PDX6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rnf220Q6PDX6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf220Q6PDX6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf220Q6PDX6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf220Q6PDX6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms