Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc2Q6PDG5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc2Q6PDG5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smarcc2Q6PDG5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc2Q6PDG5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc2Q6PDG5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Gm6916-202ENSMUST00000205523 195 ntBASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Gm18027-201ENSMUST00000218947 619 ntBASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smarcc2Q6PDG5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Gm37714-201ENSMUST00000194742 342 ntBASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc2Q6PDG5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smarcc2Q6PDG5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smarcc2Q6PDG5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.21■□□□□ 0.18
Smarcc2Q6PDG5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Mir6977-201ENSMUST00000184960 64 ntBASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Gm9229-201ENSMUST00000222777 126 ntBASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarcc2Q6PDG5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 131.4 ms