Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm9794-201ENSMUST00000202370 423 ntBASIC16.4■□□□□ 0.22
Ctr9Q62018 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.4■□□□□ 0.22
Ctr9Q62018 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.4■□□□□ 0.22
Ctr9Q62018 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctr9Q62018 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.4■□□□□ 0.22
Ctr9Q62018 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ctr9Q62018 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Ctr9Q62018 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Gm12490-201ENSMUST00000120255 560 ntBASIC16.39■□□□□ 0.21
Ctr9Q62018 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Gm18018-201ENSMUST00000198273 408 ntBASIC16.39■□□□□ 0.21
Ctr9Q62018 Gm18905-201ENSMUST00000205454 928 ntBASIC16.39■□□□□ 0.21
Ctr9Q62018 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctr9Q62018 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ctr9Q62018 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.38■□□□□ 0.21
Ctr9Q62018 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ctr9Q62018 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.38■□□□□ 0.21
Ctr9Q62018 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.38■□□□□ 0.21
Ctr9Q62018 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.38■□□□□ 0.21
Ctr9Q62018 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ctr9Q62018 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Mir6392-201ENSMUST00000184924 108 ntBASIC16.38■□□□□ 0.21
Ctr9Q62018 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Gm19220-201ENSMUST00000222682 803 ntBASIC16.38■□□□□ 0.21
Ctr9Q62018 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.38■□□□□ 0.21
Ctr9Q62018 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.38■□□□□ 0.21
Ctr9Q62018 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.38■□□□□ 0.21
Ctr9Q62018 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ctr9Q62018 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ctr9Q62018 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.38■□□□□ 0.21
Ctr9Q62018 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ctr9Q62018 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctr9Q62018 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms