Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Sox17Q61473 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.04□□□□□ -0.32
Sox17Q61473 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sox17Q61473 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox17Q61473 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.04□□□□□ -0.32
Sox17Q61473 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Gm27301-201ENSMUST00000184012 127 ntBASIC13.04□□□□□ -0.32
Sox17Q61473 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.04□□□□□ -0.32
Sox17Q61473 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.04□□□□□ -0.32
Sox17Q61473 Thap2-203ENSMUST00000218989 527 ntBASIC13.04□□□□□ -0.32
Sox17Q61473 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.04□□□□□ -0.32
Sox17Q61473 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Sox17Q61473 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sox17Q61473 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.04□□□□□ -0.32
Sox17Q61473 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox17Q61473 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox17Q61473 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sox17Q61473 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox17Q61473 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox17Q61473 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox17Q61473 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.03□□□□□ -0.32
Sox17Q61473 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.03□□□□□ -0.32
Sox17Q61473 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox17Q61473 Gm18041-201ENSMUST00000218210 618 ntBASIC13.03□□□□□ -0.32
Sox17Q61473 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.03□□□□□ -0.32
Sox17Q61473 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox17Q61473 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Sox17Q61473 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox17Q61473 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.03□□□□□ -0.32
Sox17Q61473 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox17Q61473 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.03□□□□□ -0.32
Sox17Q61473 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sox17Q61473 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sox17Q61473 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sox17Q61473 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.02□□□□□ -0.32
Sox17Q61473 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.02□□□□□ -0.32
Sox17Q61473 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox17Q61473 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox17Q61473 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox17Q61473 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox17Q61473 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.02□□□□□ -0.32
Sox17Q61473 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Sox17Q61473 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox17Q61473 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Sox17Q61473 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.02□□□□□ -0.33
Sox17Q61473 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Sox17Q61473 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox17Q61473 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms