Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Birc2-201ENSMUST00000054878 378 ntBASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm27300-201ENSMUST00000184085 97 ntBASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm27335-201ENSMUST00000184758 97 ntBASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm44608-201ENSMUST00000206827 855 ntBASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms