Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-3Q5R1C3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-3Q5R1C3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Gm4459-201ENSMUST00000118750 468 ntBASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Gm15358-201ENSMUST00000119249 520 ntBASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Olfr129-201ENSMUST00000122318 993 ntBASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Gm27357-201ENSMUST00000183754 135 ntBASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Gm27704-201ENSMUST00000185094 107 ntBASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms