Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Urb1Q571H0 Gm27572-201ENSMUST00000183702 255 ntBASIC12.81□□□□□ -0.36
Urb1Q571H0 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.81□□□□□ -0.36
Urb1Q571H0 Gm43118-201ENSMUST00000199149 775 ntBASIC12.81□□□□□ -0.36
Urb1Q571H0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.81□□□□□ -0.36
Urb1Q571H0 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.81□□□□□ -0.36
Urb1Q571H0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.81□□□□□ -0.36
Urb1Q571H0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Urb1Q571H0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.81□□□□□ -0.36
Urb1Q571H0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.81□□□□□ -0.36
Urb1Q571H0 Gm22331-201ENSMUST00000158066 136 ntBASIC12.81□□□□□ -0.36
Urb1Q571H0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.81□□□□□ -0.36
Urb1Q571H0 Gm40466-201ENSMUST00000212174 422 ntBASIC12.81□□□□□ -0.36
Urb1Q571H0 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.81□□□□□ -0.36
Urb1Q571H0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.81□□□□□ -0.36
Urb1Q571H0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Urb1Q571H0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.8□□□□□ -0.36
Urb1Q571H0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Gm8749-201ENSMUST00000117737 331 ntBASIC12.8□□□□□ -0.36
Urb1Q571H0 Gm11814-201ENSMUST00000119515 929 ntBASIC12.8□□□□□ -0.36
Urb1Q571H0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Gm5370-201ENSMUST00000187187 574 ntBASIC12.8□□□□□ -0.36
Urb1Q571H0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Gm45930-201ENSMUST00000221330 292 ntBASIC12.8□□□□□ -0.36
Urb1Q571H0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.8□□□□□ -0.36
Urb1Q571H0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Urb1Q571H0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.8□□□□□ -0.36
Urb1Q571H0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Urb1Q571H0 Gm11803-201ENSMUST00000119966 444 ntBASIC12.79□□□□□ -0.36
Urb1Q571H0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.79□□□□□ -0.36
Urb1Q571H0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Urb1Q571H0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Urb1Q571H0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.79□□□□□ -0.36
Urb1Q571H0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.79□□□□□ -0.36
Urb1Q571H0 Gm3786-201ENSMUST00000202659 378 ntBASIC12.79□□□□□ -0.36
Urb1Q571H0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.79□□□□□ -0.36
Urb1Q571H0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Urb1Q571H0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Urb1Q571H0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Urb1Q571H0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Urb1Q571H0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Urb1Q571H0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Urb1Q571H0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Urb1Q571H0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Urb1Q571H0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms