Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h1Q4VGL6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h1Q4VGL6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Gm14127-201ENSMUST00000117906 678 ntBASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Gm12485-201ENSMUST00000119641 291 ntBASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Gm27772-201ENSMUST00000184900 187 ntBASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Gm18558-201ENSMUST00000186253 1214 ntBASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h1Q4VGL6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Rc3h1Q4VGL6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rc3h1Q4VGL6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rc3h1Q4VGL6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rc3h1Q4VGL6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rc3h1Q4VGL6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Rc3h1Q4VGL6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.02■□□□□ 0.15
Rc3h1Q4VGL6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.02■□□□□ 0.15
Rc3h1Q4VGL6 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.02■□□□□ 0.15
Rc3h1Q4VGL6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h1Q4VGL6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms