Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.22■□□□□ 0.19
Prpf38aQ4FK66 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38aQ4FK66 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38aQ4FK66 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prpf38aQ4FK66 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prpf38aQ4FK66 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.22■□□□□ 0.19
Prpf38aQ4FK66 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38aQ4FK66 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.22■□□□□ 0.19
Prpf38aQ4FK66 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38aQ4FK66 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf38aQ4FK66 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.21■□□□□ 0.18
Prpf38aQ4FK66 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prpf38aQ4FK66 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prpf38aQ4FK66 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.21■□□□□ 0.18
Prpf38aQ4FK66 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Gm2495-201ENSMUST00000191160 466 ntBASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf38aQ4FK66 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Gm15429-201ENSMUST00000151268 798 ntBASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Gm27892-201ENSMUST00000185017 106 ntBASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms