Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Gm15427-201ENSMUST00000117288 531 ntBASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Gm16198-201ENSMUST00000118766 670 ntBASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf149Q3U2C5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf149Q3U2C5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Gm4995-201ENSMUST00000117247 432 ntBASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Gm25911-201ENSMUST00000157621 56 ntBASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf149Q3U2C5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms