Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd8Q09XV5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.31□□□□□ -0.44
Chd8Q09XV5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.3□□□□□ -0.44
Chd8Q09XV5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Gm45433-201ENSMUST00000209386 247 ntBASIC12.3□□□□□ -0.44
Chd8Q09XV5 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.3□□□□□ -0.44
Chd8Q09XV5 Gm14005-208ENSMUST00000223654 681 ntBASIC12.3□□□□□ -0.44
Chd8Q09XV5 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.3□□□□□ -0.44
Chd8Q09XV5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd8Q09XV5 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Gm2231-201ENSMUST00000125661 612 ntBASIC12.29□□□□□ -0.44
Chd8Q09XV5 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Gm9111-201ENSMUST00000219394 709 ntBASIC12.29□□□□□ -0.44
Chd8Q09XV5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Gm23270-201ENSMUST00000104055 131 ntBASIC12.29□□□□□ -0.44
Chd8Q09XV5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Gm42518-201ENSMUST00000196277 938 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms