Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf1Q07802 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf1Q07802 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf1Q07802 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf1Q07802 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ebf1Q07802 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ebf1Q07802 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ebf1Q07802 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ebf1Q07802 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Gm12882-201ENSMUST00000121696 517 ntBASIC14.09□□□□□ -0.15
Ebf1Q07802 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.09□□□□□ -0.15
Ebf1Q07802 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.09□□□□□ -0.15
Ebf1Q07802 Mir1982-201ENSMUST00000157368 74 ntBASIC14.09□□□□□ -0.15
Ebf1Q07802 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.09□□□□□ -0.15
Ebf1Q07802 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.09□□□□□ -0.15
Ebf1Q07802 Gm18307-201ENSMUST00000206864 949 ntBASIC14.09□□□□□ -0.15
Ebf1Q07802 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Gm5356-201ENSMUST00000093326 615 ntBASIC14.09□□□□□ -0.15
Ebf1Q07802 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.09□□□□□ -0.15
Ebf1Q07802 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ebf1Q07802 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Ebf1Q07802 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.09□□□□□ -0.15
Ebf1Q07802 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.09□□□□□ -0.15
Ebf1Q07802 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ebf1Q07802 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf1Q07802 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ebf1Q07802 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ebf1Q07802 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.08□□□□□ -0.15
Ebf1Q07802 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ebf1Q07802 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ebf1Q07802 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ebf1Q07802 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf1Q07802 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf1Q07802 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf1Q07802 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.08□□□□□ -0.16
Ebf1Q07802 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf1Q07802 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ebf1Q07802 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ebf1Q07802 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.08□□□□□ -0.16
Ebf1Q07802 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf1Q07802 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf1Q07802 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf1Q07802 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf1Q07802 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf1Q07802 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf1Q07802 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.07□□□□□ -0.16
Ebf1Q07802 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Ebf1Q07802 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.07□□□□□ -0.16
Ebf1Q07802 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ebf1Q07802 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.07□□□□□ -0.16
Ebf1Q07802 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ebf1Q07802 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ebf1Q07802 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.07□□□□□ -0.16
Ebf1Q07802 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ebf1Q07802 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.07□□□□□ -0.16
Ebf1Q07802 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ebf1Q07802 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms