Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.23□□□□□ -0.45
Thbs3Q05895 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.23□□□□□ -0.45
Thbs3Q05895 Gm10766-202ENSMUST00000194123 606 ntBASIC12.23□□□□□ -0.45
Thbs3Q05895 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.23□□□□□ -0.45
Thbs3Q05895 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Thbs3Q05895 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.23□□□□□ -0.45
Thbs3Q05895 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Thbs3Q05895 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Thbs3Q05895 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Thbs3Q05895 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.22□□□□□ -0.45
Thbs3Q05895 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Thbs3Q05895 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.22□□□□□ -0.45
Thbs3Q05895 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.22□□□□□ -0.45
Thbs3Q05895 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Thbs3Q05895 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Thbs3Q05895 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Thbs3Q05895 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Thbs3Q05895 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Thbs3Q05895 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.22□□□□□ -0.45
Thbs3Q05895 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Thbs3Q05895 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Thbs3Q05895 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Thbs3Q05895 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Thbs3Q05895 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Thbs3Q05895 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Thbs3Q05895 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Thbs3Q05895 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Thbs3Q05895 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Gm4875-201ENSMUST00000118257 786 ntBASIC12.21□□□□□ -0.45
Thbs3Q05895 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Thbs3Q05895 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Thbs3Q05895 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.21□□□□□ -0.45
Thbs3Q05895 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Thbs3Q05895 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Thbs3Q05895 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.21□□□□□ -0.46
Thbs3Q05895 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Thbs3Q05895 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.21□□□□□ -0.46
Thbs3Q05895 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Thbs3Q05895 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Thbs3Q05895 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Thbs3Q05895 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Thbs3Q05895 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Thbs3Q05895 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Thbs3Q05895 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Thbs3Q05895 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Thbs3Q05895 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Thbs3Q05895 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms