Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Gm12948-201ENSMUST00000119406 682 ntBASIC13.63□□□□□ -0.23
Col9a1Q05722 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.63□□□□□ -0.23
Col9a1Q05722 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.63□□□□□ -0.23
Col9a1Q05722 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.63□□□□□ -0.23
Col9a1Q05722 Olfr1153-201ENSMUST00000052300 957 ntBASIC13.63□□□□□ -0.23
Col9a1Q05722 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Col9a1Q05722 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col9a1Q05722 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Col9a1Q05722 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.62□□□□□ -0.23
Col9a1Q05722 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col9a1Q05722 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.62□□□□□ -0.23
Col9a1Q05722 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC13.62□□□□□ -0.23
Col9a1Q05722 Gm15276-201ENSMUST00000145953 498 ntBASIC13.62□□□□□ -0.23
Col9a1Q05722 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Gm6222-202ENSMUST00000182143 629 ntBASIC13.62□□□□□ -0.23
Col9a1Q05722 Gm37684-201ENSMUST00000192779 355 ntBASIC13.62□□□□□ -0.23
Col9a1Q05722 Gm38247-201ENSMUST00000194675 433 ntBASIC13.62□□□□□ -0.23
Col9a1Q05722 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Col9a1Q05722 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.62□□□□□ -0.23
Col9a1Q05722 Gm7439-201ENSMUST00000214053 835 ntBASIC13.62□□□□□ -0.23
Col9a1Q05722 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.62□□□□□ -0.23
Col9a1Q05722 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col9a1Q05722 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Gm5403-201ENSMUST00000117105 2795 ntBASIC13.62□□□□□ -0.23
Col9a1Q05722 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.62□□□□□ -0.23
Col9a1Q05722 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col9a1Q05722 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.61□□□□□ -0.23
Col9a1Q05722 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col9a1Q05722 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.61□□□□□ -0.23
Col9a1Q05722 Gm29011-201ENSMUST00000191059 712 ntBASIC13.61□□□□□ -0.23
Col9a1Q05722 Gm38144-201ENSMUST00000192790 465 ntBASIC13.61□□□□□ -0.23
Col9a1Q05722 Gm38317-201ENSMUST00000195564 343 ntBASIC13.61□□□□□ -0.23
Col9a1Q05722 Gm43610-201ENSMUST00000199117 365 ntBASIC13.61□□□□□ -0.23
Col9a1Q05722 Gm272-201ENSMUST00000222073 919 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms