Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.84□□□□□ -0.03
VcpQ01853 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.84□□□□□ -0.03
VcpQ01853 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Mir1897-201ENSMUST00000122581 272 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.84□□□□□ -0.03
VcpQ01853 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.84□□□□□ -0.03
VcpQ01853 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.84□□□□□ -0.03
VcpQ01853 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VcpQ01853 Gm9522-201ENSMUST00000182394 926 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm29310-201ENSMUST00000185468 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21825-201ENSMUST00000185728 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm29109-201ENSMUST00000185895 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21896-201ENSMUST00000186520 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21873-201ENSMUST00000186728 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21794-201ENSMUST00000187056 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21880-201ENSMUST00000187275 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21826-201ENSMUST00000187451 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21198-201ENSMUST00000188393 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21749-201ENSMUST00000189343 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21901-201ENSMUST00000189568 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm29424-201ENSMUST00000189716 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm28599-201ENSMUST00000189838 694 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21867-201ENSMUST00000189917 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm29269-201ENSMUST00000190087 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Gm21722-201ENSMUST00000190153 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm28423-201ENSMUST00000190701 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21899-201ENSMUST00000190745 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21910-201ENSMUST00000191163 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21849-201ENSMUST00000191571 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm28678-201ENSMUST00000191593 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm20910-201ENSMUST00000193268 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm21871-201ENSMUST00000194621 696 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Gm5035-201ENSMUST00000215581 927 ntBASIC14.84□□□□□ -0.03
VcpQ01853 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
VcpQ01853 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
VcpQ01853 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.84□□□□□ -0.03
VcpQ01853 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcpQ01853 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VcpQ01853 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
VcpQ01853 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
VcpQ01853 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VcpQ01853 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VcpQ01853 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VcpQ01853 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VcpQ01853 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VcpQ01853 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.83□□□□□ -0.04
VcpQ01853 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Gm5566-201ENSMUST00000116118 459 ntBASIC14.83□□□□□ -0.04
VcpQ01853 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.83□□□□□ -0.04
VcpQ01853 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.83□□□□□ -0.04
VcpQ01853 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.83□□□□□ -0.04
VcpQ01853 Gm6222-201ENSMUST00000120787 396 ntBASIC14.83□□□□□ -0.04
VcpQ01853 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.83□□□□□ -0.04
VcpQ01853 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.83□□□□□ -0.04
VcpQ01853 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VcpQ01853 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.83□□□□□ -0.04
VcpQ01853 Gm46209-201ENSMUST00000217912 553 ntBASIC14.83□□□□□ -0.04
VcpQ01853 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.83□□□□□ -0.04
VcpQ01853 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
VcpQ01853 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VcpQ01853 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VcpQ01853 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
VcpQ01853 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcpQ01853 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcpQ01853 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcpQ01853 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
VcpQ01853 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcpQ01853 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcpQ01853 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VcpQ01853 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
VcpQ01853 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.82□□□□□ -0.04
VcpQ01853 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VcpQ01853 Gm4984-201ENSMUST00000115987 360 ntBASIC14.82□□□□□ -0.04
VcpQ01853 Gm12957-201ENSMUST00000117835 377 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms