Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.3■□□□□ 0.36
Col1a2Q01149 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col1a2Q01149 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col1a2Q01149 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col1a2Q01149 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.3■□□□□ 0.36
Col1a2Q01149 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col1a2Q01149 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col1a2Q01149 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Col1a2Q01149 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.3■□□□□ 0.36
Col1a2Q01149 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col1a2Q01149 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col1a2Q01149 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.29■□□□□ 0.36
Col1a2Q01149 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.29■□□□□ 0.36
Col1a2Q01149 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Gm38144-201ENSMUST00000192790 465 ntBASIC17.29■□□□□ 0.36
Col1a2Q01149 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.29■□□□□ 0.36
Col1a2Q01149 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.29■□□□□ 0.36
Col1a2Q01149 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Col1a2Q01149 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Col1a2Q01149 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col1a2Q01149 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col1a2Q01149 Gm10156-201ENSMUST00000122364 462 ntBASIC17.28■□□□□ 0.36
Col1a2Q01149 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Gm8810-201ENSMUST00000172895 754 ntBASIC17.28■□□□□ 0.36
Col1a2Q01149 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.28■□□□□ 0.36
Col1a2Q01149 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Col1a2Q01149 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.28■□□□□ 0.36
Col1a2Q01149 Gm26315-201ENSMUST00000083890 321 ntBASIC17.28■□□□□ 0.36
Col1a2Q01149 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Col1a2Q01149 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.28■□□□□ 0.36
Col1a2Q01149 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Col1a2Q01149 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 Gm8213-201ENSMUST00000118191 441 ntBASIC17.28■□□□□ 0.36
Col1a2Q01149 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.28■□□□□ 0.36
Col1a2Q01149 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.28■□□□□ 0.36
Col1a2Q01149 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col1a2Q01149 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.28■□□□□ 0.36
Col1a2Q01149 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col1a2Q01149 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col1a2Q01149 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col1a2Q01149 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Col1a2Q01149 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col1a2Q01149 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.27■□□□□ 0.36
Col1a2Q01149 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col1a2Q01149 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.27■□□□□ 0.36
Col1a2Q01149 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col1a2Q01149 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col1a2Q01149 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col1a2Q01149 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Col1a2Q01149 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col1a2Q01149 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Col1a2Q01149 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col1a2Q01149 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.27■□□□□ 0.35
Col1a2Q01149 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col1a2Q01149 Snora78-201ENSMUST00000158630 128 ntBASIC17.27■□□□□ 0.35
Col1a2Q01149 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.27■□□□□ 0.35
Col1a2Q01149 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.27■□□□□ 0.35
Col1a2Q01149 Gm43630-201ENSMUST00000201550 776 ntBASIC17.27■□□□□ 0.35
Col1a2Q01149 Itm2b-204ENSMUST00000228637 783 ntBASIC17.27■□□□□ 0.35
Col1a2Q01149 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col1a2Q01149 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col1a2Q01149 Gm9899-201ENSMUST00000065519 555 ntBASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms