Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca2P97929 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.13□□□□□ -0.31
Brca2P97929 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.13□□□□□ -0.31
Brca2P97929 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Brca2P97929 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.13□□□□□ -0.31
Brca2P97929 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Brca2P97929 Gm13316-201ENSMUST00000140537 691 ntBASIC13.13□□□□□ -0.31
Brca2P97929 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Brca2P97929 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Brca2P97929 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca2P97929 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca2P97929 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca2P97929 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca2P97929 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca2P97929 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca2P97929 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brca2P97929 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.13□□□□□ -0.31
Brca2P97929 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca2P97929 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.13□□□□□ -0.31
Brca2P97929 Gm3890-201ENSMUST00000182416 207 ntBASIC13.13□□□□□ -0.31
Brca2P97929 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Brca2P97929 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Brca2P97929 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Brca2P97929 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Brca2P97929 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.12□□□□□ -0.31
Brca2P97929 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Brca2P97929 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Brca2P97929 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.12□□□□□ -0.31
Brca2P97929 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Brca2P97929 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.12□□□□□ -0.31
Brca2P97929 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.12□□□□□ -0.31
Brca2P97929 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.12□□□□□ -0.31
Brca2P97929 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.12□□□□□ -0.31
Brca2P97929 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.12□□□□□ -0.31
Brca2P97929 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Brca2P97929 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca2P97929 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.12□□□□□ -0.31
Brca2P97929 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.11□□□□□ -0.31
Brca2P97929 Gm11222-201ENSMUST00000119005 738 ntBASIC13.11□□□□□ -0.31
Brca2P97929 Gm14208-201ENSMUST00000119645 678 ntBASIC13.11□□□□□ -0.31
Brca2P97929 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.11□□□□□ -0.31
Brca2P97929 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.11□□□□□ -0.31
Brca2P97929 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.11□□□□□ -0.31
Brca2P97929 Gm45118-201ENSMUST00000208928 825 ntBASIC13.11□□□□□ -0.31
Brca2P97929 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.11□□□□□ -0.31
Brca2P97929 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.11□□□□□ -0.31
Brca2P97929 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.11□□□□□ -0.31
Brca2P97929 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.11□□□□□ -0.31
Brca2P97929 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.11□□□□□ -0.31
Brca2P97929 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.11□□□□□ -0.31
Brca2P97929 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Gm12217-201ENSMUST00000118858 696 ntBASIC13.11□□□□□ -0.31
Brca2P97929 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Brca2P97929 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.11□□□□□ -0.31
Brca2P97929 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.11□□□□□ -0.31
Brca2P97929 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Brca2P97929 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca2P97929 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca2P97929 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Brca2P97929 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Brca2P97929 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.1□□□□□ -0.31
Brca2P97929 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca2P97929 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms