Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.23□□□□□ -0.93
PrkdcP97313 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.23□□□□□ -0.93
PrkdcP97313 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PrkdcP97313 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Gm16202-201ENSMUST00000117532 544 ntBASIC9.22□□□□□ -0.93
PrkdcP97313 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
PrkdcP97313 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
PrkdcP97313 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.22□□□□□ -0.93
PrkdcP97313 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Gm3809-201ENSMUST00000180973 1006 ntBASIC9.22□□□□□ -0.93
PrkdcP97313 Rprl1-202ENSMUST00000198476 238 ntBASIC9.22□□□□□ -0.93
PrkdcP97313 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 AC126549.2-201ENSMUST00000223997 1976 ntBASIC9.22□□□□□ -0.93
PrkdcP97313 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Gm13035-201ENSMUST00000117496 342 ntBASIC9.22□□□□□ -0.93
PrkdcP97313 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.22□□□□□ -0.93
PrkdcP97313 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC9.22□□□□□ -0.93
PrkdcP97313 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Gm22121-201ENSMUST00000175148 54 ntBASIC9.22□□□□□ -0.93
PrkdcP97313 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PrkdcP97313 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Gm16425-201ENSMUST00000118143 3130 ntBASIC9.22□□□□□ -0.93
PrkdcP97313 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC9.22□□□□□ -0.93
PrkdcP97313 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.21□□□□□ -0.93
PrkdcP97313 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC9.21□□□□□ -0.93
PrkdcP97313 Gm11340-201ENSMUST00000119226 412 ntBASIC9.21□□□□□ -0.93
PrkdcP97313 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.21□□□□□ -0.93
PrkdcP97313 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.21□□□□□ -0.93
PrkdcP97313 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
PrkdcP97313 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Gm29155-201ENSMUST00000185910 269 ntBASIC9.21□□□□□ -0.93
PrkdcP97313 Gm28693-202ENSMUST00000190758 331 ntBASIC9.21□□□□□ -0.93
PrkdcP97313 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.21□□□□□ -0.93
PrkdcP97313 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.21□□□□□ -0.93
PrkdcP97313 Gm10076-201ENSMUST00000073238 384 ntBASIC9.21□□□□□ -0.93
PrkdcP97313 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
PrkdcP97313 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.21□□□□□ -0.93
PrkdcP97313 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Gm25951-201ENSMUST00000175330 64 ntBASIC9.21□□□□□ -0.93
PrkdcP97313 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.21□□□□□ -0.93
PrkdcP97313 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PrkdcP97313 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.21□□□□□ -0.93
PrkdcP97313 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC9.21□□□□□ -0.93
PrkdcP97313 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PrkdcP97313 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PrkdcP97313 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PrkdcP97313 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.21□□□□□ -0.94
PrkdcP97313 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PrkdcP97313 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PrkdcP97313 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PrkdcP97313 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PrkdcP97313 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms