Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
Trim43bP86448 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trim43bP86448 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim43bP86448 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.34□□□□□ -0.11
Trim43bP86448 Mir6956-201ENSMUST00000183598 62 ntBASIC14.34□□□□□ -0.11
Trim43bP86448 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim43bP86448 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.34□□□□□ -0.11
Trim43bP86448 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim43bP86448 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.34□□□□□ -0.11
Trim43bP86448 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.34□□□□□ -0.11
Trim43bP86448 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.34□□□□□ -0.11
Trim43bP86448 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim43bP86448 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trim43bP86448 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim43bP86448 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43bP86448 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43bP86448 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43bP86448 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.33□□□□□ -0.11
Trim43bP86448 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trim43bP86448 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43bP86448 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim43bP86448 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim43bP86448 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim43bP86448 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trim43bP86448 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Trim43bP86448 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim43bP86448 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Trim43bP86448 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.33□□□□□ -0.12
Trim43bP86448 Gm18041-201ENSMUST00000218210 618 ntBASIC14.33□□□□□ -0.12
Trim43bP86448 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.33□□□□□ -0.12
Trim43bP86448 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim43bP86448 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim43bP86448 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Trim43bP86448 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43bP86448 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trim43bP86448 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.32□□□□□ -0.12
Trim43bP86448 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.32□□□□□ -0.12
Trim43bP86448 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim43bP86448 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim43bP86448 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim43bP86448 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.32□□□□□ -0.12
Trim43bP86448 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim43bP86448 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim43bP86448 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Gm7774-201ENSMUST00000200064 533 ntBASIC14.32□□□□□ -0.12
Trim43bP86448 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43bP86448 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms