Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Otx1P80205 Gm38294-201ENSMUST00000192831 381 ntBASIC11.99□□□□□ -0.49
Otx1P80205 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.99□□□□□ -0.49
Otx1P80205 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Gm43703-201ENSMUST00000200523 763 ntBASIC11.99□□□□□ -0.49
Otx1P80205 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Otx1P80205 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Otx1P80205 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.99□□□□□ -0.49
Otx1P80205 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Otx1P80205 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.99□□□□□ -0.49
Otx1P80205 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Otx1P80205 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Otx1P80205 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Otx1P80205 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.99□□□□□ -0.49
Otx1P80205 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Otx1P80205 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.98□□□□□ -0.49
Otx1P80205 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.98□□□□□ -0.49
Otx1P80205 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Otx1P80205 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.98□□□□□ -0.49
Otx1P80205 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.98□□□□□ -0.49
Otx1P80205 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Otx1P80205 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Otx1P80205 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Otx1P80205 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.98□□□□□ -0.49
Otx1P80205 Gm12585-201ENSMUST00000117307 290 ntBASIC11.98□□□□□ -0.49
Otx1P80205 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.98□□□□□ -0.49
Otx1P80205 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.98□□□□□ -0.49
Otx1P80205 Gm4804-201ENSMUST00000182234 999 ntBASIC11.98□□□□□ -0.49
Otx1P80205 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.98□□□□□ -0.49
Otx1P80205 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.98□□□□□ -0.49
Otx1P80205 Gm44719-201ENSMUST00000206404 149 ntBASIC11.98□□□□□ -0.49
Otx1P80205 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.98□□□□□ -0.49
Otx1P80205 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Otx1P80205 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Otx1P80205 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Otx1P80205 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Otx1P80205 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.97□□□□□ -0.49
Otx1P80205 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Otx1P80205 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Otx1P80205 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Otx1P80205 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Otx1P80205 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Otx1P80205 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.97□□□□□ -0.49
Otx1P80205 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Otx1P80205 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.97□□□□□ -0.49
Otx1P80205 Gm15393-201ENSMUST00000120499 219 ntBASIC11.97□□□□□ -0.49
Otx1P80205 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Otx1P80205 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Otx1P80205 Gm27306-201ENSMUST00000183970 107 ntBASIC11.97□□□□□ -0.49
Otx1P80205 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Otx1P80205 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Otx1P80205 Gm10766-202ENSMUST00000194123 606 ntBASIC11.97□□□□□ -0.49
Otx1P80205 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms