Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.04■□□□□ -0
CiitaP79621 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.04■□□□□ -0
CiitaP79621 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CiitaP79621 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CiitaP79621 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CiitaP79621 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.04■□□□□ -0
CiitaP79621 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CiitaP79621 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
CiitaP79621 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.03■□□□□ -0
CiitaP79621 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
CiitaP79621 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CiitaP79621 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.03■□□□□ -0
CiitaP79621 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.03■□□□□ -0
CiitaP79621 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.03■□□□□ -0
CiitaP79621 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.03■□□□□ -0
CiitaP79621 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.03■□□□□ -0
CiitaP79621 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.03■□□□□ -0
CiitaP79621 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.03■□□□□ -0
CiitaP79621 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.03■□□□□ -0
CiitaP79621 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.03■□□□□ -0
CiitaP79621 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CiitaP79621 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CiitaP79621 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.03■□□□□ -0
CiitaP79621 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CiitaP79621 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.02■□□□□ -0
CiitaP79621 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CiitaP79621 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CiitaP79621 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.02■□□□□ -0
CiitaP79621 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CiitaP79621 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CiitaP79621 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CiitaP79621 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
CiitaP79621 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.02■□□□□ -0
CiitaP79621 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CiitaP79621 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CiitaP79621 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.02■□□□□ -0
CiitaP79621 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.02■□□□□ -0
CiitaP79621 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CiitaP79621 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.02■□□□□ -0
CiitaP79621 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.02■□□□□ -0
CiitaP79621 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.02■□□□□ -0
CiitaP79621 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CiitaP79621 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.02□□□□□ -0.01
CiitaP79621 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.02□□□□□ -0.01
CiitaP79621 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CiitaP79621 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
CiitaP79621 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CiitaP79621 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CiitaP79621 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CiitaP79621 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CiitaP79621 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CiitaP79621 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CiitaP79621 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms