Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Usp9xP70398 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.44□□□□□ -0.58
Usp9xP70398 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.44□□□□□ -0.58
Usp9xP70398 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Usp9xP70398 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Usp9xP70398 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.44□□□□□ -0.58
Usp9xP70398 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Usp9xP70398 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.44□□□□□ -0.58
Usp9xP70398 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.44□□□□□ -0.58
Usp9xP70398 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.44□□□□□ -0.58
Usp9xP70398 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Usp9xP70398 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Usp9xP70398 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC11.43□□□□□ -0.58
Usp9xP70398 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Usp9xP70398 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.43□□□□□ -0.58
Usp9xP70398 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Usp9xP70398 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Usp9xP70398 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.43□□□□□ -0.58
Usp9xP70398 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Usp9xP70398 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Usp9xP70398 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Usp9xP70398 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Gm11222-201ENSMUST00000119005 738 ntBASIC11.43□□□□□ -0.58
Usp9xP70398 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.43□□□□□ -0.58
Usp9xP70398 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.43□□□□□ -0.58
Usp9xP70398 Gm18212-201ENSMUST00000211678 889 ntBASIC11.43□□□□□ -0.58
Usp9xP70398 Itm2b-204ENSMUST00000228637 783 ntBASIC11.43□□□□□ -0.58
Usp9xP70398 Gm24447-201ENSMUST00000083977 338 ntBASIC11.43□□□□□ -0.58
Usp9xP70398 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.43□□□□□ -0.58
Usp9xP70398 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.43□□□□□ -0.58
Usp9xP70398 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Usp9xP70398 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Usp9xP70398 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp9xP70398 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp9xP70398 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp9xP70398 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp9xP70398 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp9xP70398 Gm12217-201ENSMUST00000118858 696 ntBASIC11.42□□□□□ -0.58
Usp9xP70398 Gm8566-201ENSMUST00000120174 465 ntBASIC11.42□□□□□ -0.58
Usp9xP70398 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.42□□□□□ -0.58
Usp9xP70398 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.42□□□□□ -0.58
Usp9xP70398 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Usp9xP70398 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp9xP70398 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp9xP70398 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp9xP70398 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Usp9xP70398 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp9xP70398 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.42□□□□□ -0.58
Usp9xP70398 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Usp9xP70398 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Usp9xP70398 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms