Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgb1P63158 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.31■□□□□ 0.04
Hmgb1P63158 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Hmgb1P63158 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.31■□□□□ 0.04
Hmgb1P63158 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.31■□□□□ 0.04
Hmgb1P63158 Gm18766-201ENSMUST00000189811 808 ntBASIC15.31■□□□□ 0.04
Hmgb1P63158 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hmgb1P63158 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Gm37057-201ENSMUST00000192624 1916 ntBASIC15.31■□□□□ 0.04
Hmgb1P63158 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgb1P63158 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Hmgb1P63158 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm22065-201ENSMUST00000103753 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm22066-201ENSMUST00000103761 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm24932-201ENSMUST00000103763 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm24115-201ENSMUST00000103799 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm22190-201ENSMUST00000103827 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm22191-201ENSMUST00000103831 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm24721-201ENSMUST00000103849 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm28018-201ENSMUST00000103869 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm26399-201ENSMUST00000103937 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm4995-201ENSMUST00000117247 432 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hmgb1P63158 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Hmgb1P63158 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm25349-201ENSMUST00000177728 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm23616-201ENSMUST00000177797 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm25871-201ENSMUST00000177816 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm24752-201ENSMUST00000178240 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm24496-201ENSMUST00000178287 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm25649-201ENSMUST00000178476 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm25548-201ENSMUST00000178681 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm23147-201ENSMUST00000178841 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm26095-201ENSMUST00000179270 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm22171-201ENSMUST00000179283 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm23936-201ENSMUST00000179354 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm22619-201ENSMUST00000179516 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm25255-201ENSMUST00000179579 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm24755-201ENSMUST00000179691 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm26506-201ENSMUST00000179692 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm25086-201ENSMUST00000179931 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm23243-201ENSMUST00000180047 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm24659-201ENSMUST00000180212 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm24169-201ENSMUST00000180244 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm23689-201ENSMUST00000180354 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm27359-201ENSMUST00000184153 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm27785-201ENSMUST00000184268 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm27466-201ENSMUST00000184396 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Gm27703-201ENSMUST00000184836 110 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.3■□□□□ 0.04
Hmgb1P63158 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgb1P63158 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms