Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ybx1P62960 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.23□□□□□ -0.13
Ybx1P62960 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ybx1P62960 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.23□□□□□ -0.13
Ybx1P62960 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ybx1P62960 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ybx1P62960 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.22□□□□□ -0.13
Ybx1P62960 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.22□□□□□ -0.13
Ybx1P62960 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.22□□□□□ -0.13
Ybx1P62960 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.22□□□□□ -0.13
Ybx1P62960 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.22□□□□□ -0.13
Ybx1P62960 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.22□□□□□ -0.13
Ybx1P62960 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Ybx1P62960 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.22□□□□□ -0.13
Ybx1P62960 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ybx1P62960 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.21□□□□□ -0.13
Ybx1P62960 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Ybx1P62960 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ybx1P62960 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.21□□□□□ -0.13
Ybx1P62960 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Ybx1P62960 Gm27847-201ENSMUST00000183711 107 ntBASIC14.21□□□□□ -0.13
Ybx1P62960 Gm27375-201ENSMUST00000183799 107 ntBASIC14.21□□□□□ -0.13
Ybx1P62960 Gm27731-201ENSMUST00000185192 107 ntBASIC14.21□□□□□ -0.13
Ybx1P62960 Gm37424-201ENSMUST00000191727 561 ntBASIC14.21□□□□□ -0.13
Ybx1P62960 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
Ybx1P62960 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.21□□□□□ -0.13
Ybx1P62960 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ybx1P62960 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.21□□□□□ -0.14
Ybx1P62960 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ybx1P62960 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ybx1P62960 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.21□□□□□ -0.14
Ybx1P62960 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ybx1P62960 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ybx1P62960 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.2□□□□□ -0.14
Ybx1P62960 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ybx1P62960 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ybx1P62960 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ybx1P62960 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ybx1P62960 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Gm12485-201ENSMUST00000119641 291 ntBASIC14.2□□□□□ -0.14
Ybx1P62960 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.2□□□□□ -0.14
Ybx1P62960 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.2□□□□□ -0.14
Ybx1P62960 Gm24420-201ENSMUST00000176676 59 ntBASIC14.2□□□□□ -0.14
Ybx1P62960 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.2□□□□□ -0.14
Ybx1P62960 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Gm42693-201ENSMUST00000196779 631 ntBASIC14.2□□□□□ -0.14
Ybx1P62960 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.2□□□□□ -0.14
Ybx1P62960 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ybx1P62960 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ybx1P62960 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.2□□□□□ -0.14
Ybx1P62960 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.19□□□□□ -0.14
Ybx1P62960 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ybx1P62960 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms