Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC9.92□□□□□ -0.82
Rpl39P62892 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC9.92□□□□□ -0.82
Rpl39P62892 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Gm10275-202ENSMUST00000168697 495 ntBASIC9.92□□□□□ -0.82
Rpl39P62892 Gm2272-201ENSMUST00000194903 582 ntBASIC9.92□□□□□ -0.82
Rpl39P62892 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC9.92□□□□□ -0.82
Rpl39P62892 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Gm10275-201ENSMUST00000092620 635 ntBASIC9.92□□□□□ -0.82
Rpl39P62892 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC9.92□□□□□ -0.82
Rpl39P62892 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Rpl39P62892 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rpl39P62892 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rpl39P62892 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Gm20632-201ENSMUST00000176760 2427 ntBASIC9.92□□□□□ -0.82
Rpl39P62892 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Gm9109-201ENSMUST00000120254 1405 ntBASIC9.91□□□□□ -0.82
Rpl39P62892 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rpl39P62892 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rpl39P62892 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Rpl39P62892 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
Rpl39P62892 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rpl39P62892 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Rpl39P62892 Gm5479-201ENSMUST00000160578 435 ntBASIC9.91□□□□□ -0.82
Rpl39P62892 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC9.91□□□□□ -0.82
Rpl39P62892 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rpl39P62892 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC9.91□□□□□ -0.82
Rpl39P62892 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC9.91□□□□□ -0.82
Rpl39P62892 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC9.91□□□□□ -0.82
Rpl39P62892 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Rpl39P62892 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Gm9347-201ENSMUST00000211473 1607 ntBASIC9.91□□□□□ -0.82
Rpl39P62892 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Rpl39P62892 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC9.91□□□□□ -0.82
Rpl39P62892 Ankra2-208ENSMUST00000226100 1476 ntBASIC9.91□□□□□ -0.82
Rpl39P62892 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rpl39P62892 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rpl39P62892 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC9.9□□□□□ -0.82
Rpl39P62892 Gm7153-201ENSMUST00000117092 455 ntBASIC9.9□□□□□ -0.82
Rpl39P62892 Gm6184-201ENSMUST00000120403 1261 ntBASIC9.9□□□□□ -0.82
Rpl39P62892 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Rpl39P62892 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rpl39P62892 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC9.9□□□□□ -0.82
Rpl39P62892 Gm27300-201ENSMUST00000184085 97 ntBASIC9.9□□□□□ -0.82
Rpl39P62892 Gm27335-201ENSMUST00000184758 97 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms