Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Lsm5P62322 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Lsm5P62322 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lsm5P62322 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.58□□□□□ -0.56
Lsm5P62322 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lsm5P62322 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Lsm5P62322 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.58□□□□□ -0.56
Lsm5P62322 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.58□□□□□ -0.56
Lsm5P62322 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.58□□□□□ -0.56
Lsm5P62322 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Lsm5P62322 Gm27704-201ENSMUST00000185094 107 ntBASIC11.58□□□□□ -0.56
Lsm5P62322 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.58□□□□□ -0.56
Lsm5P62322 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.58□□□□□ -0.56
Lsm5P62322 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Lsm5P62322 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Lsm5P62322 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.58□□□□□ -0.56
Lsm5P62322 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Lsm5P62322 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Lsm5P62322 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm5P62322 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.58□□□□□ -0.56
Lsm5P62322 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lsm5P62322 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Lsm5P62322 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lsm5P62322 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lsm5P62322 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lsm5P62322 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lsm5P62322 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Lsm5P62322 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lsm5P62322 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Lsm5P62322 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lsm5P62322 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.57□□□□□ -0.56
Lsm5P62322 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.57□□□□□ -0.56
Lsm5P62322 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Lsm5P62322 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lsm5P62322 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lsm5P62322 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm5P62322 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Lsm5P62322 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Lsm5P62322 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
Lsm5P62322 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.56□□□□□ -0.56
Lsm5P62322 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Lsm5P62322 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Gm6089-201ENSMUST00000197666 938 ntBASIC11.56□□□□□ -0.56
Lsm5P62322 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm5P62322 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms