Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm3P62311 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lsm3P62311 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm3P62311 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm3P62311 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.65□□□□□ -0.38
Lsm3P62311 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Lsm3P62311 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm3P62311 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Lsm3P62311 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm3P62311 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lsm3P62311 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm3P62311 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.65□□□□□ -0.38
Lsm3P62311 Gm15565-201ENSMUST00000118890 427 ntBASIC12.65□□□□□ -0.38
Lsm3P62311 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.65□□□□□ -0.38
Lsm3P62311 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Lsm3P62311 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.65□□□□□ -0.38
Lsm3P62311 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.65□□□□□ -0.38
Lsm3P62311 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.65□□□□□ -0.38
Lsm3P62311 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm3P62311 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm3P62311 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm3P62311 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm3P62311 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.65□□□□□ -0.38
Lsm3P62311 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.65□□□□□ -0.38
Lsm3P62311 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm3P62311 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lsm3P62311 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm3P62311 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lsm3P62311 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lsm3P62311 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.64□□□□□ -0.39
Lsm3P62311 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm3P62311 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.64□□□□□ -0.39
Lsm3P62311 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm3P62311 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Lsm3P62311 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.64□□□□□ -0.39
Lsm3P62311 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Lsm3P62311 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.64□□□□□ -0.39
Lsm3P62311 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lsm3P62311 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm3P62311 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm3P62311 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.63□□□□□ -0.39
Lsm3P62311 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Lsm3P62311 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.63□□□□□ -0.39
Lsm3P62311 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm3P62311 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm3P62311 Gm6433-201ENSMUST00000118634 875 ntBASIC12.63□□□□□ -0.39
Lsm3P62311 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.63□□□□□ -0.39
Lsm3P62311 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.63□□□□□ -0.39
Lsm3P62311 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm3P62311 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.63□□□□□ -0.39
Lsm3P62311 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm3P62311 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.63□□□□□ -0.39
Lsm3P62311 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lsm3P62311 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm3P62311 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms