Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.84□□□□□ -0.67
Ctdsp1P58466 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctdsp1P58466 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.83□□□□□ -0.68
Ctdsp1P58466 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.83□□□□□ -0.68
Ctdsp1P58466 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.83□□□□□ -0.68
Ctdsp1P58466 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctdsp1P58466 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Ctdsp1P58466 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.82□□□□□ -0.68
Ctdsp1P58466 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Gm12497-201ENSMUST00000138778 237 ntBASIC10.82□□□□□ -0.68
Ctdsp1P58466 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.82□□□□□ -0.68
Ctdsp1P58466 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Mir5130-201ENSMUST00000175160 84 ntBASIC10.82□□□□□ -0.68
Ctdsp1P58466 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.82□□□□□ -0.68
Ctdsp1P58466 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ctdsp1P58466 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.82□□□□□ -0.68
Ctdsp1P58466 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ctdsp1P58466 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms