Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.6□□□□□ -0.55
Cks2P56390 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.6□□□□□ -0.55
Cks2P56390 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.6□□□□□ -0.55
Cks2P56390 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cks2P56390 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.6□□□□□ -0.55
Cks2P56390 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cks2P56390 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cks2P56390 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Cks2P56390 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cks2P56390 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Cks2P56390 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.59□□□□□ -0.55
Cks2P56390 Gm15427-201ENSMUST00000117288 531 ntBASIC11.59□□□□□ -0.55
Cks2P56390 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.59□□□□□ -0.55
Cks2P56390 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.59□□□□□ -0.55
Cks2P56390 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.59□□□□□ -0.55
Cks2P56390 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.59□□□□□ -0.55
Cks2P56390 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.59□□□□□ -0.55
Cks2P56390 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.59□□□□□ -0.55
Cks2P56390 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.59□□□□□ -0.55
Cks2P56390 Gm44492-201ENSMUST00000197012 141 ntBASIC11.59□□□□□ -0.55
Cks2P56390 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.59□□□□□ -0.55
Cks2P56390 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Gm10819-201ENSMUST00000099988 561 ntBASIC11.59□□□□□ -0.55
Cks2P56390 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.59□□□□□ -0.55
Cks2P56390 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.59□□□□□ -0.55
Cks2P56390 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cks2P56390 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.59□□□□□ -0.55
Cks2P56390 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.59□□□□□ -0.55
Cks2P56390 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.59□□□□□ -0.55
Cks2P56390 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cks2P56390 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cks2P56390 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.59□□□□□ -0.55
Cks2P56390 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cks2P56390 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cks2P56390 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cks2P56390 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Cks2P56390 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.58□□□□□ -0.55
Cks2P56390 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Cks2P56390 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.58□□□□□ -0.56
Cks2P56390 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.58□□□□□ -0.56
Cks2P56390 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.58□□□□□ -0.56
Cks2P56390 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cks2P56390 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cks2P56390 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.58□□□□□ -0.56
Cks2P56390 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.58□□□□□ -0.56
Cks2P56390 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.58□□□□□ -0.56
Cks2P56390 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cks2P56390 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cks2P56390 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cks2P56390 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.58□□□□□ -0.56
Cks2P56390 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.58□□□□□ -0.56
Cks2P56390 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.58□□□□□ -0.56
Cks2P56390 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cks2P56390 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cks2P56390 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms