Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rrp1P56183 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.69■□□□□ 0.1
Rrp1P56183 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 Gm6736-201ENSMUST00000166583 948 ntBASIC15.69■□□□□ 0.1
Rrp1P56183 Gm27397-201ENSMUST00000184997 107 ntBASIC15.69■□□□□ 0.1
Rrp1P56183 Gm38225-201ENSMUST00000194001 393 ntBASIC15.69■□□□□ 0.1
Rrp1P56183 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.69■□□□□ 0.1
Rrp1P56183 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Rrp1P56183 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Rrp1P56183 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp1P56183 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.68■□□□□ 0.1
Rrp1P56183 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.68■□□□□ 0.1
Rrp1P56183 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.68■□□□□ 0.1
Rrp1P56183 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.68■□□□□ 0.1
Rrp1P56183 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Rrp1P56183 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rrp1P56183 Gm14822-201ENSMUST00000122247 291 ntBASIC15.68■□□□□ 0.1
Rrp1P56183 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Gm24513-201ENSMUST00000174964 138 ntBASIC15.68■□□□□ 0.1
Rrp1P56183 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Gm27702-201ENSMUST00000184512 56 ntBASIC15.68■□□□□ 0.1
Rrp1P56183 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rrp1P56183 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Rrp1P56183 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rrp1P56183 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rrp1P56183 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp1P56183 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.67■□□□□ 0.1
Rrp1P56183 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.67■□□□□ 0.1
Rrp1P56183 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.67■□□□□ 0.1
Rrp1P56183 Gm29741-201ENSMUST00000192667 421 ntBASIC15.67■□□□□ 0.1
Rrp1P56183 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.67■□□□□ 0.1
Rrp1P56183 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.67■□□□□ 0.1
Rrp1P56183 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.67■□□□□ 0.1
Rrp1P56183 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.67■□□□□ 0.1
Rrp1P56183 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rrp1P56183 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rrp1P56183 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.67■□□□□ 0.1
Rrp1P56183 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.67■□□□□ 0.1
Rrp1P56183 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.67■□□□□ 0.1
Rrp1P56183 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp1P56183 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Rrp1P56183 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.66■□□□□ 0.1
Rrp1P56183 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms