Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdx1P52946 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Pdx1P52946 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Pdx1P52946 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pdx1P52946 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Pdx1P52946 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pdx1P52946 Gm2445-201ENSMUST00000182798 989 ntBASIC13.75□□□□□ -0.21
Pdx1P52946 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pdx1P52946 Gm29667-201ENSMUST00000190817 490 ntBASIC13.75□□□□□ -0.21
Pdx1P52946 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.75□□□□□ -0.21
Pdx1P52946 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.75□□□□□ -0.21
Pdx1P52946 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.75□□□□□ -0.21
Pdx1P52946 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.75□□□□□ -0.21
Pdx1P52946 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.75□□□□□ -0.21
Pdx1P52946 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.75□□□□□ -0.21
Pdx1P52946 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.75□□□□□ -0.21
Pdx1P52946 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Pdx1P52946 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pdx1P52946 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pdx1P52946 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdx1P52946 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pdx1P52946 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pdx1P52946 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pdx1P52946 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.74□□□□□ -0.21
Pdx1P52946 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Gm14719-201ENSMUST00000121891 340 ntBASIC13.74□□□□□ -0.21
Pdx1P52946 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.74□□□□□ -0.21
Pdx1P52946 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.74□□□□□ -0.21
Pdx1P52946 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Gm9522-201ENSMUST00000182394 926 ntBASIC13.74□□□□□ -0.21
Pdx1P52946 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.74□□□□□ -0.21
Pdx1P52946 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.74□□□□□ -0.21
Pdx1P52946 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pdx1P52946 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.74□□□□□ -0.21
Pdx1P52946 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.74□□□□□ -0.21
Pdx1P52946 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pdx1P52946 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.74□□□□□ -0.21
Pdx1P52946 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdx1P52946 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pdx1P52946 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pdx1P52946 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.74□□□□□ -0.21
Pdx1P52946 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pdx1P52946 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Pdx1P52946 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pdx1P52946 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdx1P52946 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms